zzh
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  • Joined on 2023-08-03
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zzh pushed to main at zzh/FastSort
dbe57f345c 添加了并行流水线框架
7ee5241029 解决了读如文件时，解析block跨buffer的bug
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2025-04-25 15:34:53 +08:00
zzh pushed to main at zzh/FastSort
0d2c533d59 添加了串行解析线程
2025-04-23 22:08:44 +08:00
zzh pushed to main at zzh/FastDup
62538d512d update some annotations
2025-04-23 15:07:31 +08:00
zzh pushed to main at zzh/FastDup
6175ce9a83 Merge branch 'main' of https://github.com/zzhofict/FastDup
8cbff0ff69 update readme
49ecf7ae5f update readme
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2025-04-23 15:04:04 +08:00
zzh pushed to main at zzh/FastDup
ab7da8a7d7 Change some annotations
2025-04-23 14:59:45 +08:00
zzh pushed to main at zzh/FastSort
9b2c35eaeb 解析header完整了，读取文件并解析gz block的框架正确了
2025-04-22 00:38:44 +08:00
zzh pushed to main at zzh/FastSort
bcb8b420ba 正常读完文件，然后退出
2025-04-17 18:29:16 +08:00
zzh pushed to main at zzh/FastSort
588abd70f2 Init
2025-04-17 16:17:48 +08:00
zzh created repository zzh/FastSort
2025-04-17 16:13:22 +08:00
zzh pushed to main at zzh/FastDup
b0b9efdc66 Add test files and script
2025-04-16 22:20:28 +08:00
zzh created repository zzh/FastBQSR
2025-04-15 16:48:37 +08:00
zzh pushed to main at zzh/FastDup
32920ffe64 注释了一些调试代码
2025-04-14 15:36:25 +08:00
zzh created repository zzh/FastDup
2025-04-14 15:35:53 +08:00
zzh pushed to single-seq at zzh/fast-bwa
8f3cb79d6f 在avx2中加入了一些特殊判断，保证了和串行的sw结果保持基本一致
2024-03-01 18:45:14 +08:00
zzh pushed to single-seq at zzh/fast-bwa
5cd4c10858 减少了频繁开辟释放内存，基本是所有优化手段都加上了，只是simd版本的准确性还有待进一步完善
2024-02-27 16:11:06 +08:00
zzh created branch single-seq in zzh/fast-bwa
2024-02-23 01:13:21 +08:00
zzh pushed to single-seq at zzh/fast-bwa
2024-02-23 01:13:21 +08:00
zzh pushed to main at zzh/fast-bwa
02a6116131 将seed和extend部分修改成了batch模式，好像没啥效果
2024-02-23 01:09:13 +08:00
zzh pushed to main at zzh/fast-bwa
d51903b923 忽略sam文件
a1a3f4215c 删除调试输出的sam文件
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2024-02-22 01:32:23 +08:00
zzh pushed to main at zzh/fast-bwa
198fe34ddb 做了一些代码清理，目前结果应该是完全一致的
2024-02-22 01:28:22 +08:00