From e4aa0362f96fd2e42f6390414cb3528387d3aab0 Mon Sep 17 00:00:00 2001
From: zzh <zzhofhust@gmail.com>
Date: Thu, 21 Nov 2024 16:44:49 +0800
Subject: [PATCH] =?UTF-8?q?=E6=B5=8B=E8=AF=95tumor?=
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---
 run.sh | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/run.sh b/run.sh
index dcd8b97..8f3b6bc 100755
--- a/run.sh
+++ b/run.sh
@@ -7,8 +7,8 @@ nthread=32
 #nthread=64
 #nthread=128
 #input=/home/zzh/data/bam/zy_normal.bam
-#input=/home/zzh/data/bam/zy_tumor.bam
-input=/home/zzh/data/wgs_na12878.bam
+input=/home/zzh/data/bam/zy_tumor.bam
+#input=/home/zzh/data/wgs_na12878.bam
 #input=~/data/bam/100w.bam
 #input=~/data/bam/t100w.sam
 #input=~/data/bam/1k.sam
@@ -27,7 +27,7 @@ time /home/zzh/work/ngs/picard_cpp/build/bin/picard_cpp \
     --num_threads $nthread \
     --max_mem 2G \
     --verbosity DEBUG \
-    --asyncio true -TAG_DUPLICATE_SET_MEMBERS true --READ_NAME_REGEX null #
+    --asyncio true -TAG_DUPLICATE_SET_MEMBERS true #--READ_NAME_REGEX null #
     #--TAG_DUPLICATE_SET_MEMBERS true #--READ_NAME_REGEX ""
     #--READ_NAME_REGEX ".*?([0-9]+):([0-9]+):([0-9]+)$"
     #--READ_NAME_REGEX ""