From a2a9067ec5d4c8774d0ff743fb676cb345f2d203 Mon Sep 17 00:00:00 2001 From: zzh Date: Mon, 23 Oct 2023 21:48:31 +0800 Subject: [PATCH] init stubs --- CMakeLists.txt | 0 README.md | 5 ++++- src/CMakeLists.txt | 0 src/main.cpp | 0 src/module.h | 0 src/sam/markdups/markdups.cpp | 0 src/sam/markdups/markdups_arg.cpp | 0 src/sam/markdups/markdups_arg.h | 0 8 files changed, 4 insertions(+), 1 deletion(-) create mode 100644 CMakeLists.txt create mode 100644 src/CMakeLists.txt create mode 100644 src/main.cpp create mode 100644 src/module.h create mode 100644 src/sam/markdups/markdups.cpp create mode 100644 src/sam/markdups/markdups_arg.cpp create mode 100644 src/sam/markdups/markdups_arg.h diff --git a/CMakeLists.txt b/CMakeLists.txt new file mode 100644 index 0000000..e69de29 diff --git a/README.md b/README.md index ccfb186..00264be 100644 --- a/README.md +++ b/README.md @@ -1,3 +1,6 @@ # picard_cpp -cpp重写picard，对bam进行去冗余等操作 \ No newline at end of file +cpp重写picard，对bam进行去冗余等操作 + +# 依赖的第三方库 +- htslib diff --git a/src/CMakeLists.txt b/src/CMakeLists.txt new file mode 100644 index 0000000..e69de29 diff --git a/src/main.cpp b/src/main.cpp new file mode 100644 index 0000000..e69de29 diff --git a/src/module.h b/src/module.h new file mode 100644 index 0000000..e69de29 diff --git a/src/sam/markdups/markdups.cpp b/src/sam/markdups/markdups.cpp new file mode 100644 index 0000000..e69de29 diff --git a/src/sam/markdups/markdups_arg.cpp b/src/sam/markdups/markdups_arg.cpp new file mode 100644 index 0000000..e69de29 diff --git a/src/sam/markdups/markdups_arg.h b/src/sam/markdups/markdups_arg.h new file mode 100644 index 0000000..e69de29