48 lines
1.5 KiB
Markdown
48 lines
1.5 KiB
Markdown
Release 2.0-r275 (8 August 2017)
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This release is identical to version 2.0rc1, except the version number. It is
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described and evaluated in the following technical report:
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* Li, H. (2017). Minimap2: fast pairwise alignment for long DNA sequences.
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[arXiv:1708.01492v1](https://arxiv.org/abs/1708.01492v1).
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(2.0: 8 August 2017, r275)
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Release 2.0rc1-r232 (30 July 2017)
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----------------------------------
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This release improves the accuracy of long-read alignment and added several
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minor features.
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* Improved mapping quality estimate for short alignments containing few seed
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hits.
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* Fixed a minor bug that affects the chaining accuracy towards the ends of a
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chain. Changed the gap cost for chaining to reduce false seeding.
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* Skip potentially wrong seeding and apply dynamic programming more frequently.
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This slightly increases run time, but greatly reduces false long gaps.
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* Perform local alignment at Z-drop break point to recover potential inversion
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alignment. Output the SA tag in the SAM format. Added scripts to evaluate
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mapping accuracy for reads simulated with pbsim.
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This release completes features intended for v2.0. No major features will be
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added to the master branch before the final v2.0.
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(2.0rc1: 30 July 2017, r232)
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Release r191 (19 July 2017)
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This is the first public release of minimap2, an aligner for long reads and
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assemblies. This release has a few issues and is generally not recommended for
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production uses.
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(19 July 2017, r191)
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