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tex
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diagonal global almost working
|
2017-06-16 12:17:23 -04:00 |
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.gitignore
|
make sdust working with kalloc
|
2017-04-06 15:51:36 -04:00 |
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Makefile
|
backup
|
2017-06-06 10:16:33 -04:00 |
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bseq.c
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index can be compiled; not tested yet
|
2017-04-07 15:30:30 -04:00 |
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bseq.h
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index can be compiled; not tested yet
|
2017-04-07 15:30:30 -04:00 |
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chain.c
|
fixed a bug
|
2017-06-07 11:40:13 -04:00 |
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index.c
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fixed a bug in chaining
|
2017-06-06 14:33:43 -04:00 |
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kalloc.c
|
fixed a few memory leaks
|
2017-04-13 23:05:19 -04:00 |
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kalloc.h
|
Homopolymer-compressed k-mer sketch
|
2017-04-06 15:37:34 -04:00 |
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kdq.h
|
make sdust working with kalloc
|
2017-04-06 15:51:36 -04:00 |
|
khash.h
|
index can be compiled; not tested yet
|
2017-04-07 15:30:30 -04:00 |
|
kseq.h
|
Homopolymer-compressed k-mer sketch
|
2017-04-06 15:37:34 -04:00 |
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ksort.h
|
chaining
|
2017-05-03 20:47:29 +08:00 |
|
ksw2.c
|
fixed a boundary bug in global()
|
2017-06-16 12:47:09 -04:00 |
|
ksw2.h
|
diagonal global almost working
|
2017-06-16 12:17:23 -04:00 |
|
kthread.c
|
index can be compiled; not tested yet
|
2017-04-07 15:30:30 -04:00 |
|
kthread.h
|
index can be compiled; not tested yet
|
2017-04-07 15:30:30 -04:00 |
|
kvec.h
|
Homopolymer-compressed k-mer sketch
|
2017-04-06 15:37:34 -04:00 |
|
main.c
|
r36: bring back primary; don't output all mappings
|
2017-06-08 15:28:19 -04:00 |
|
map.c
|
disable k-mer intersection for now
|
2017-06-11 14:13:41 -04:00 |
|
minimap.h
|
r36: bring back primary; don't output all mappings
|
2017-06-08 15:28:19 -04:00 |
|
misc.c
|
sort positions in each bucket
|
2017-04-12 13:31:12 -04:00 |
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mmpriv.h
|
minor tweaks
|
2017-06-06 15:31:21 -04:00 |
|
sdust.c
|
fixed memory leaks
|
2017-06-06 21:45:55 -04:00 |
|
sdust.h
|
fixed a few memory leaks
|
2017-04-13 23:05:19 -04:00 |
|
sketch.c
|
wrong HPC
|
2017-05-04 17:45:19 +08:00 |
359b829350