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.gitignore
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make sdust working with kalloc
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2017-04-06 15:51:36 -04:00 |
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Makefile
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enabled kalloc (was a mistake)
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2017-06-26 15:41:55 -04:00 |
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align.c
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r78: fixed a split bug
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2017-06-26 14:45:23 -04:00 |
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bseq.c
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index can be compiled; not tested yet
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2017-04-07 15:30:30 -04:00 |
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bseq.h
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index can be compiled; not tested yet
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2017-04-07 15:30:30 -04:00 |
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chain.c
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r77: fixed an index loading bug (offset not set)
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2017-06-26 13:56:25 -04:00 |
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format.c
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use long options
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2017-06-26 12:31:36 -04:00 |
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index.c
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r77: fixed an index loading bug (offset not set)
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2017-06-26 13:56:25 -04:00 |
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kalloc.c
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don't round to power-of-2
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2017-06-26 22:10:45 -04:00 |
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kalloc.h
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Homopolymer-compressed k-mer sketch
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2017-04-06 15:37:34 -04:00 |
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kdq.h
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make sdust working with kalloc
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2017-04-06 15:51:36 -04:00 |
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khash.h
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index can be compiled; not tested yet
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2017-04-07 15:30:30 -04:00 |
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kseq.h
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Homopolymer-compressed k-mer sketch
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2017-04-06 15:37:34 -04:00 |
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ksort.h
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chaining
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2017-05-03 20:47:29 +08:00 |
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ksw2.h
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backup
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2017-06-23 18:57:00 -04:00 |
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ksw2_extz2_sse.c
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disabled dynamic banding; buggy
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2017-06-25 22:43:15 -04:00 |
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kthread.c
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index can be compiled; not tested yet
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2017-04-07 15:30:30 -04:00 |
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kthread.h
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index can be compiled; not tested yet
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2017-04-07 15:30:30 -04:00 |
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kvec.h
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Homopolymer-compressed k-mer sketch
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2017-04-06 15:37:34 -04:00 |
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main.c
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r79: drop bad hits
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2017-06-26 15:28:04 -04:00 |
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map.c
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r79: drop bad hits
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2017-06-26 15:28:04 -04:00 |
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minimap.h
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command-line option to control CIGAR output
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2017-06-26 11:41:09 -04:00 |
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misc.c
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sort positions in each bucket
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2017-04-12 13:31:12 -04:00 |
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mmpriv.h
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sam output
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2017-06-25 22:05:20 -04:00 |
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sdust.c
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fixed memory leaks
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2017-06-06 21:45:55 -04:00 |
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sdust.h
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fixed a few memory leaks
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2017-04-13 23:05:19 -04:00 |
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sketch.c
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wrong HPC
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2017-05-04 17:45:19 +08:00 |
0d03a43efd