Commit Graph

16 Commits (d08b58d21fe1db594992a35faa7855019e5d65e9)

Author SHA1 Message Date
Heng Li d08b58d21f minor 2017-06-24 19:33:59 -04:00
Heng Li 672782f03a simplified hp_len a little 2017-06-24 19:27:58 -04:00
Heng Li 2d8fda9586 an alternative strategy to fix for HPC
it makes the result better, but still not quite right.
2017-06-24 09:26:24 -04:00
Heng Li 6088dc11ff wrong SW score 2017-06-23 23:24:49 -04:00
Heng Li 2987be288c output cigar 2017-06-23 22:53:47 -04:00
Heng Li 35b84f88c6 backup 2017-06-23 22:42:15 -04:00
Heng Li 523a8832ad backup 2017-06-23 20:57:17 -04:00
Heng Li 7ed26a4857 backup 2017-06-23 19:31:23 -04:00
Heng Li d75b5b4e8a backup; NOT working yet 2017-06-23 19:21:47 -04:00
Heng Li 4fea3d778a backup 2017-06-23 18:57:00 -04:00
Heng Li 6c8368c24c get the left-extension sequence correctly 2017-06-23 18:25:47 -04:00
Heng Li 990f7b0b71 backup 2017-06-23 15:13:53 -04:00
Heng Li 4ae0b46972 min_ksw_len 2017-06-23 14:38:28 -04:00
Heng Li 9cd313eae1 sequence retrieval working 2017-06-23 14:11:56 -04:00
Heng Li 326d91deb0 backup 2017-06-23 14:06:00 -04:00
Heng Li 44cdd18de0 start to work on alignment 2017-06-23 13:44:45 -04:00