5 Commits (bf8246f8729e45be1f6a8d8cdcecb4979a67eb76)

Author	SHA1	Message	Date
Heng Li	993a2bb521	r301: separate introns from deletions ... When an intron is adjacent to a deletion, the old code count both as introns, which lead to an inaccurate exon boundary.	2017-08-18 15:31:15 +08:00
Heng Li	43506edbc5	backup: preliminary boundary alignment	2017-08-12 23:10:14 -04:00
Heng Li	bcfe00d2ad	minor formatting changes	2017-08-12 19:09:33 -04:00
Heng Li	17c19e5819	exts2 working	2017-08-12 19:06:59 -04:00
Heng Li	61eef0575c	separate out spliced alignment; not right yet	2017-08-12 18:54:32 -04:00