Commit Graph

12 Commits (843729df1e94e7e75cad3ee5a45f9e6e9695caae)

Author SHA1 Message Date
Heng Li d2e14705e7 r968: allow large mini_batch; resolves #491 2020-01-18 12:24:44 -05:00
Heng Li 08bd2123b6 r752: option to copy comments to output (#136) 2018-03-23 10:04:33 -04:00
Heng Li 9c5767f9ed r477: renamed multi_seg to frag_mode 2017-10-05 15:48:17 -04:00
Heng Li 7cc4f6f965 r469: first step towards PE SAM 2017-10-05 10:38:09 -04:00
Heng Li 3bb66e1ed3 multi-seg working on toy examples 2017-09-25 13:42:04 -04:00
Heng Li a742f10164 get multi-seg code ready; probably not working yet 2017-09-24 15:17:17 -04:00
Heng Li f0951141a1 allow to read multiple files interleaved 2017-09-24 14:33:05 -04:00
Heng Li 71c988f6ab r188: renamed bseq* to mm_bseq*
to avoid naming collisions between minimap2 and bwa/fermi-lite/etc
2017-07-19 09:26:46 -04:00
Heng Li 41efd03d7a r129: fixed memory leak caused by qualities 2017-06-30 23:48:00 -04:00
Heng Li fce87ce7bd r121: output QUAL and unmapped to SAM 2017-06-30 14:40:54 -04:00
Heng Li b3bc4911ba index can be compiled; not tested yet 2017-04-07 15:30:30 -04:00
Heng Li 01baa847a1 Homopolymer-compressed k-mer sketch 2017-04-06 15:37:34 -04:00