56 Commits (791e89ce0fe108a77d1d427ffa127c69dd860736)

Author	SHA1	Message	Date
Heng Li	c4871f380c	r114: make SAM output better	2017-06-29 23:08:41 -04:00
Heng Li	11167f511b	r112: output z-drop	2017-06-29 22:08:46 -04:00
Heng Li	4cd456b9ba	r108: refactoring, move reg1 routines to hit.c	2017-06-29 19:44:11 -04:00
Heng Li	4b8e88a5f4	use long options	2017-06-26 12:31:36 -04:00
Heng Li	b1077ff14c	sam output	2017-06-25 22:05:20 -04:00
Heng Li	39083be9ab	separated formating printing ... for SAM in future; and for performance	2017-06-25 16:13:54 -04:00