1c4b7e8a48
explained --junc-bed in README
2021-03-06 19:44:24 -05:00
ccb0f7b05d
added a new Makefile for simde
2020-04-25 22:43:29 -04:00
3e16e4e39d
Added documentation entry for added functionality, simde and no_simd.
2020-04-21 01:36:19 +02:00
5cb61f8ee6
added FAQ
2019-06-06 10:47:33 -04:00
7bc87b4175
Release minimap2-2.17 (r941)
2019-05-04 23:49:17 -04:00
6762368cf0
r940: added the splice:hq preset
...
for high-quality CCS/mRNA splice alignment
2019-05-04 14:00:31 -04:00
6b391e3373
Release minimap2-2.16 (r922)
2019-02-28 15:49:24 -05:00
ccf1680aaf
make it explicit that -x is preferred for prebuilt
2019-02-27 12:43:33 -05:00
a8e1e3cbb8
updated citation with page numbers
2019-01-26 17:59:36 -05:00
c404f49569
Release minimap2-2.15 (r905)
2019-01-10 12:34:45 -05:00
59f23f7579
Release minimap2-2.14 (r883)
2018-11-06 00:03:16 -05:00
51e2abfa60
clarify that minimap2 may miss small exons
2018-10-22 11:16:16 -04:00
5d5d392c02
Release minimap2-2.13 (r850)
2018-10-11 13:18:31 -04:00
a5eafb75f9
Release minimap2-2.12 (r827)
2018-08-06 12:44:39 -04:00
8e606bcc06
added a `-C5` example to Getting Started
2018-08-06 09:08:33 -04:00
0517972d02
Release minimap2-2.11 (r797)
2018-06-21 00:04:08 -04:00
99dcd75f64
added support for 64 bit ARM architectures
2018-06-19 14:28:45 -04:00
d7b61a039e
updated citation
2018-05-30 11:11:55 -04:00
248158a3e1
Resolved #168 : citing the manpage for cs
2018-05-30 11:03:16 -04:00
2d7ec75d50
Release minimap2-2.10 (r761)
2018-03-27 11:45:44 -04:00
4740423afa
Merge remote-tracking branch 'origin/master'
2018-03-26 14:37:17 -04:00
1776311a9b
updated cookbook
2018-03-26 14:37:02 -04:00
ecb6703d4a
Update README.md
...
Fix typo.
TD;DR -> TL;DR
2018-03-26 14:54:52 +08:00
19e05a099d
for clarity
2018-03-01 18:25:29 -05:00
0238caa8b1
clarify minimap2 not working for >2Gbp seq #129
2018-03-01 18:23:40 -05:00
eeb314edd6
Release minimap2-2.9 (r720)
2018-02-24 09:31:09 -05:00
54a42aafe5
keep documents in sync
2018-02-15 17:21:09 -05:00
53ce317e59
Release minimap2-2.8 (r672)
2018-02-01 12:50:20 -05:00
eecc06086f
Released minimap2-2.7 (r654)
2018-01-09 13:16:00 -05:00
fcac296c4a
clarify ARM-NEON support in README
2017-12-18 23:01:44 -05:00
8995e2e078
added support for arm neon
2017-12-15 17:42:19 +11:00
eb819c29e8
Release minimap2-2.6 (r623)
2017-12-12 11:09:59 -05:00
f6608fe99c
r620: revamped thread-local memory management
...
* Don't preallocate sdust_buf or minizer list. kalloc should be fast enough -
benchmarks needed to confirm.
* Fixed a memory leak caused by divergence estimate (post v2.5)
* Reset the kalloc buffer after mapping a long query. This reduces peak memory
when large chunks of memory are allocated, at the cost of performance, though.
2017-12-11 12:11:10 -05:00
571161d5a2
changed badges
2017-12-01 16:16:27 -05:00
07d41efc2b
explain secondary/supplementary aln for RNA-seq
2017-11-30 23:02:20 -05:00
35b6d9f7d5
direct manpage to HTML
2017-11-24 11:05:20 -05:00
3b518271ee
Release minimap2-2.5 (r572)
2017-11-11 11:29:28 -05:00
c047c852ce
Update README.md
...
25: changed -x ava-one to -x ava-ont
2017-11-08 13:07:01 +01:00
21a46ba652
Release minimap2-2.4 (r555)
2017-11-06 12:54:02 -05:00
a3f0aa1d5b
r550: fixed -L issues with secondary and supp aln
2017-11-04 12:13:38 -04:00
7f11f4c4d4
Instructions on different long RNA-seq techs
2017-10-29 13:58:25 -04:00
e6f66f2f3b
disabled download counts
...
seems not working any more
2017-10-24 14:40:08 -04:00
70735098e2
fixed a typo in README
2017-10-24 14:39:33 -04:00
5acd709524
updated the download link to v2.3
2017-10-23 13:43:31 -04:00
306e4541f8
Released minimap2-2.3 (r531)
2017-10-22 23:13:35 -04:00
c6b6392b70
minor wording changes
2017-10-21 23:46:36 -04:00
dc37aee881
minor wording changes
2017-10-21 23:38:05 -04:00
37e627aa98
note on long cigar in README
2017-10-21 22:28:06 -04:00
27025c70a7
added evaluation scripts to README
2017-10-12 12:55:10 -04:00
9bafbe4e70
added Getting help and cs
2017-10-12 12:40:52 -04:00
Heng Li
mbrcic
Hasindu Gamaarachchi
zingdle
Hasindu Gamaarachchi
Carlos de Lannoy