53ce317e59
Release minimap2-2.8 (r672)
2018-02-01 12:50:20 -05:00
eecc06086f
Released minimap2-2.7 (r654)
2018-01-09 13:16:00 -05:00
fcac296c4a
clarify ARM-NEON support in README
2017-12-18 23:01:44 -05:00
8995e2e078
added support for arm neon
2017-12-15 17:42:19 +11:00
eb819c29e8
Release minimap2-2.6 (r623)
2017-12-12 11:09:59 -05:00
f6608fe99c
r620: revamped thread-local memory management
...
* Don't preallocate sdust_buf or minizer list. kalloc should be fast enough -
benchmarks needed to confirm.
* Fixed a memory leak caused by divergence estimate (post v2.5)
* Reset the kalloc buffer after mapping a long query. This reduces peak memory
when large chunks of memory are allocated, at the cost of performance, though.
2017-12-11 12:11:10 -05:00
571161d5a2
changed badges
2017-12-01 16:16:27 -05:00
07d41efc2b
explain secondary/supplementary aln for RNA-seq
2017-11-30 23:02:20 -05:00
35b6d9f7d5
direct manpage to HTML
2017-11-24 11:05:20 -05:00
3b518271ee
Release minimap2-2.5 (r572)
2017-11-11 11:29:28 -05:00
c047c852ce
Update README.md
...
25: changed -x ava-one to -x ava-ont
2017-11-08 13:07:01 +01:00
21a46ba652
Release minimap2-2.4 (r555)
2017-11-06 12:54:02 -05:00
a3f0aa1d5b
r550: fixed -L issues with secondary and supp aln
2017-11-04 12:13:38 -04:00
7f11f4c4d4
Instructions on different long RNA-seq techs
2017-10-29 13:58:25 -04:00
e6f66f2f3b
disabled download counts
...
seems not working any more
2017-10-24 14:40:08 -04:00
70735098e2
fixed a typo in README
2017-10-24 14:39:33 -04:00
5acd709524
updated the download link to v2.3
2017-10-23 13:43:31 -04:00
306e4541f8
Released minimap2-2.3 (r531)
2017-10-22 23:13:35 -04:00
c6b6392b70
minor wording changes
2017-10-21 23:46:36 -04:00
dc37aee881
minor wording changes
2017-10-21 23:38:05 -04:00
37e627aa98
note on long cigar in README
2017-10-21 22:28:06 -04:00
27025c70a7
added evaluation scripts to README
2017-10-12 12:55:10 -04:00
9bafbe4e70
added Getting help and cs
2017-10-12 12:40:52 -04:00
f150257a0d
r487: demote "map10k"; improved README
2017-10-07 19:19:40 -04:00
47b86e765b
minor wording changes
2017-10-06 15:34:20 -04:00
56acf6ee28
completed README rewrite
2017-10-06 14:26:02 -04:00
4f6244bd4a
revamped README; not finished yet
2017-10-06 13:02:25 -04:00
a686461e83
added github downloads counts
2017-09-20 10:11:58 -04:00
60485790b4
updated version number in README
2017-09-17 20:25:54 -04:00
ffff953e2c
added python version badge
2017-09-17 17:15:55 -04:00
89151b2588
added python 3.6 test
2017-09-17 00:55:31 -04:00
2f2b11624a
reverted to the Travis badge as it is faster
2017-09-13 10:50:03 -04:00
cb57bd6146
updated badges
2017-09-13 10:46:25 -04:00
885db1233d
updated badges
...
for fun
2017-09-13 10:29:41 -04:00
2bf2f137dd
added a license badge
2017-09-13 10:03:15 -04:00
2028e8c266
show bioconda version
2017-09-12 16:21:49 -04:00
0cc8d277ba
changed to the "install with conda" badge
2017-09-12 16:20:01 -04:00
14f0cce4e2
malformatted conda badge
2017-09-12 16:17:07 -04:00
8ddbf7169f
added bioconda download link
2017-09-12 16:16:26 -04:00
5f96d851a8
added spliced alignment example
2017-08-25 14:11:54 +08:00
4db0d1034b
Show travis CI status
2017-08-08 21:32:56 -04:00
8c2917b391
Added citation.
2017-08-06 21:30:47 -04:00
1f78e1ee53
r230: code formatting changes only
2017-07-30 12:31:40 -04:00
84922cfe41
clarify that wrong seeding mainly occurs in LCRs
2017-07-28 14:33:15 -04:00
667b32a516
added algorithm overview
2017-07-27 18:50:39 -04:00
a1addb2949
use -msse4 by default, not -march
2017-07-18 13:56:51 -04:00
b4edb0cf55
fixed URL
2017-07-18 13:26:51 -04:00
9a935dcef5
Fixed grammar errors
2017-07-18 11:37:58 -04:00
495a78e40a
Get documentation ready for release
2017-07-18 11:04:09 -04:00
941059292e
r179: changed the preset for assembly alignment
2017-07-17 22:41:46 -04:00
Heng Li
Hasindu Gamaarachchi
Carlos de Lannoy