Heng Li
|
b81d45510e
|
Revision v2
|
2018-03-16 11:18:06 -04:00 |
|
Heng Li
|
d135feb1a5
|
response to reviewers' comments, round 2
|
2018-03-15 21:59:57 -04:00 |
|
Heng Li
|
6e65c5e631
|
Revision 1
|
2018-02-09 17:39:02 -05:00 |
|
Heng Li
|
a58b05a61b
|
extend the section on genome alignment
|
2018-02-09 13:59:00 -05:00 |
|
Heng Li
|
01560f1db0
|
Revision v1, to be submitted
|
2018-02-07 11:07:08 -05:00 |
|
Heng Li
|
39535565ee
|
first round of revision
|
2018-02-06 16:19:22 -05:00 |
|
Heng Li
|
680b971bb0
|
deleted duplicated entries
|
2018-01-01 19:52:21 -05:00 |
|
Heng Li
|
f159e1c2d3
|
new section on HPC k-mers
|
2017-12-24 19:11:23 -05:00 |
|
Heng Li
|
99879e9e75
|
a new section on estimating sequence divergence
|
2017-12-24 12:57:38 -05:00 |
|
Heng Li
|
c969d1a1ce
|
updated direct RNA-seq results; cite syndip
and a few minor changes
|
2017-12-24 11:06:17 -05:00 |
|
Heng Li
|
1617b87ee1
|
this will become version 3 at arXiv
|
2017-11-06 10:57:12 -05:00 |
|
Heng Li
|
2191ac58ad
|
two discussion paragraphs; need one more
|
2017-11-05 12:27:52 -05:00 |
|
Heng Li
|
c2b09356b8
|
moved conclusion to result; need new discussion
|
2017-11-04 22:19:46 -04:00 |
|
Heng Li
|
52ffbc9e0c
|
added bowtie2 and snap versions
|
2017-11-02 15:51:23 -04:00 |
|
Heng Li
|
a9790c0f1d
|
added two bowtie2 numbers for comparison
|
2017-11-02 15:44:48 -04:00 |
|
Heng Li
|
d0ac78ac08
|
updated the tech note
|
2017-11-02 15:37:24 -04:00 |
|
Heng Li
|
1dd221ad82
|
a bit more on short read mapping
The tech note still needs improvement. Will do that after the release of v2.3.
|
2017-10-22 18:38:35 -04:00 |
|
Heng Li
|
bd04372873
|
r524: reverted to bwa-mem end bonus
and reduced the cost of clipping when filtering by identity
|
2017-10-20 16:57:31 -04:00 |
|
Heng Li
|
55dcbefe87
|
updated text (unfinished)
|
2017-10-20 12:44:54 -04:00 |
|
Heng Li
|
1c948e0d1d
|
added GMAP iso-seq numbers
|
2017-09-20 23:54:02 -04:00 |
|
Heng Li
|
2641613686
|
various minor improvements
|
2017-08-25 17:56:16 +08:00 |
|
Heng Li
|
240f6caaff
|
backup manuscript
|
2017-08-24 22:05:14 +08:00 |
|
Heng Li
|
b8bdac7e64
|
backup
|
2017-08-22 17:45:01 +08:00 |
|
Heng Li
|
19e4b2aab0
|
backup
|
2017-08-20 22:10:03 +08:00 |
|
Heng Li
|
8058c85b72
|
moved appendix to methods; detailed splice aln
|
2017-08-18 23:33:57 +08:00 |
|
Heng Li
|
53b3265d84
|
r290: in techrep, explain spliced alignment
|
2017-08-12 15:40:49 -04:00 |
|
Heng Li
|
648cdd8a3b
|
minor wording changes
|
2017-08-04 10:21:10 -04:00 |
|
Heng Li
|
7e231cfd3a
|
minor wording improvement
|
2017-08-03 21:28:01 -04:00 |
|
Heng Li
|
95d3c30ae3
|
rephrasing a bit to avoid the apparent TeX bug
Several hours sank into this. Damned...
|
2017-08-03 20:19:00 -04:00 |
|
Heng Li
|
f57fd8c790
|
added one transition phrase
as there are no subsubsections now
|
2017-08-03 18:01:48 -04:00 |
|
Heng Li
|
c70b20ee6d
|
removed subsubsection
TeX Live 2016 doesn't work with section and content on the same line.
|
2017-08-03 17:58:36 -04:00 |
|
Heng Li
|
ed4efd77bc
|
minor modifications
I will submit this version arXiv. There is definitely room for improvement, but
as a semi-formal technical report, it should be good for now.
|
2017-08-03 12:47:36 -04:00 |
|
Heng Li
|
295874ea30
|
spell check
|
2017-08-03 12:17:58 -04:00 |
|
Heng Li
|
9ec5f51afb
|
the first draft
|
2017-08-03 12:12:55 -04:00 |
|
Heng Li
|
28ab4d1f72
|
backup
|
2017-08-02 22:59:58 -04:00 |
|
Heng Li
|
6c9390b54a
|
backup
|
2017-08-02 19:52:31 -04:00 |
|
Heng Li
|
d933a263d7
|
backup
|
2017-08-01 13:29:02 -04:00 |
|
Heng Li
|
d6181de844
|
added tech notes
|
2017-08-01 10:38:33 -04:00 |