From ef3f7ea2f28423776364ba6a30e182ba317efb6a Mon Sep 17 00:00:00 2001 From: Heng Li Date: Wed, 6 Sep 2017 13:46:51 -0400 Subject: [PATCH] Release minimap2-2.1.1 (r341) --- NEWS.md | 23 +++++++++++++++++++++++ main.c | 2 +- minimap2.1 | 2 +- 3 files changed, 25 insertions(+), 2 deletions(-) diff --git a/NEWS.md b/NEWS.md index 5bc0d76..7b04ab6 100644 --- a/NEWS.md +++ b/NEWS.md @@ -1,3 +1,26 @@ +Release 2.1.1-r341 (6 September 2017) +------------------------------------- + +This is a maintenance release that is expected to output identical alignment to +v2.1. Detailed changes include: + + * Support CPU dispatch. By default, minimap2 is compiled with both SSE2 and + SSE4 based implementation of alignment and automatically chooses the right + one at runtime. This avoids unexpected errors on older CPUs (#21). + + * Improved Windows support as is requested by Oxford Nanopore (#19). Minimap2 + now avoids variable-length stacked arrays, eliminates alloca(), ships with + getopt_long() and provides timing functions implemented with Windows APIs. + + * Fixed a potential segmentation fault when specifying -k/-w/-H with + multi-part index (#23). + + * Fixed two memory leaks in example.c + +(2.1.1: 6 September 2017, r341) + + + Release 2.1-r311 (25 August 2017) --------------------------------- diff --git a/main.c b/main.c index 2e25625..90ad92a 100644 --- a/main.c +++ b/main.c @@ -6,7 +6,7 @@ #include "mmpriv.h" #include "getopt.h" -#define MM_VERSION "2.1-r339-dirty" +#define MM_VERSION "2.1.1-r341" #ifdef __linux__ #include diff --git a/minimap2.1 b/minimap2.1 index 61a0bdb..6cef237 100644 --- a/minimap2.1 +++ b/minimap2.1 @@ -1,4 +1,4 @@ -.TH minimap2 1 "25 August 2017" "minimap2-2.1-r311" "Bioinformatics tools" +.TH minimap2 1 "6 September 2017" "minimap2-2.1.1-r341" "Bioinformatics tools" .SH NAME .PP minimap2 - mapping and alignment between collections of DNA sequences