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r226: only try inv alignment for primary

This commit is contained in:
Heng Li 2017-07-29 14:09:35 -04:00
parent 783ead6f47
commit da3db3c095
2 changed files with 3 additions and 1 deletions
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2
align.c
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@ -362,6 +362,8 @@ static int mm_align1_inv(void *km, const mm_mapopt_t *opt, const mm_idx_t *mi, i
int8_t mat[25]; int8_t mat[25];
memset(r_inv, 0, sizeof(mm_reg1_t)); memset(r_inv, 0, sizeof(mm_reg1_t));
if (!(r1->split&1) || !(r2->split&2)) return 0; if (!(r1->split&1) || !(r2->split&2)) return 0;
if (r1->id != r1->parent && r1->parent != MM_PARENT_TMP_PRI) return 0;
if (r2->id != r2->parent && r2->parent != MM_PARENT_TMP_PRI) return 0;
if (r1->rid != r2->rid || r1->rev != r2->rev) return 0; if (r1->rid != r2->rid || r1->rev != r2->rev) return 0;
ql = r2->qs - r1->qe; ql = r2->qs - r1->qe;
tl = r2->rs - r1->re; tl = r2->rs - r1->re;

2
main.c
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@ -8,7 +8,7 @@
#include "minimap.h" #include "minimap.h"
#include "mmpriv.h" #include "mmpriv.h"
#define MM_VERSION "2.0-r225-dirty" #define MM_VERSION "2.0-r226-dirty"
void liftrlimit() void liftrlimit()
{ {