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Merge branch 'master' into dev

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Heng Li 2017-08-07 12:44:07 -04:00
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@ -31,6 +31,10 @@ and [longISLND][longislnd]), better chaining and the ability to produce CIGAR
with fast extension alignment (see also [libgaba][gaba] and [ksw2][ksw2]) and
piece-wise affine gap cost.
If you use minimap2 in your work, please consider to cite:
> Li, H. (2017). Minimap2: fast pairwise alignment for long DNA sequences. [arXiv:1708.01492](https://arxiv.org/abs/1708.01492).
## Installation
For modern x86-64 CPUs, just type `make` in the source code directory. This