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Heng Li 2017-07-01 11:26:23 -04:00
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minimap2.1
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@ -238,7 +238,6 @@ Print version number to stdout
Minimap2 outputs mapping positions in the Pairwise mApping Format (PAF) by Minimap2 outputs mapping positions in the Pairwise mApping Format (PAF) by
default. PAF is a TAB-delimited text format with each line consisting of at default. PAF is a TAB-delimited text format with each line consisting of at
least 12 fields as are described in the following table: least 12 fields as are described in the following table:
.TS .TS
center box; center box;
cb | cb | cb cb | cb | cb
@ -265,7 +264,6 @@ matches, mismatches and gaps in the alignment; column 10 divided by column 11
gives the BLAST-like alignment identity. When alignment is unavailable, gives the BLAST-like alignment identity. When alignment is unavailable,
these two columns are approximate. PAF may optionally have additional fields in these two columns are approximate. PAF may optionally have additional fields in
the SAM-like typed key-value format. Minimap2 may output the following tags: the SAM-like typed key-value format. Minimap2 may output the following tags:
.TS .TS
center box; center box;
cb | cb | cb cb | cb | cb