zzh
/
minimap2
1
0
Fork 0
Code Issues Pull Requests Packages Projects Releases Wiki Activity

disable kalloc in the debugging mode

This commit is contained in:
Heng Li 2017-06-28 10:50:27 -04:00
parent bf0e8199e2
commit b696d5fe5e
1 changed files with 2 additions and 2 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

4
map.c
View File

@ -57,7 +57,7 @@ mm_tbuf_t *mm_tbuf_init(void)
{
mm_tbuf_t *b;
b = (mm_tbuf_t*)calloc(1, sizeof(mm_tbuf_t));
b->km = km_init();
if (mm_verbose < 10) b->km = km_init();
b->sdb = sdust_buf_init(b->km);
return b;
}
@ -306,7 +306,7 @@ mm_reg1_t *mm_map_frag(const mm_mapopt_t *opt, const mm_idx_t *mi, mm_tbuf_t *b,
mm_reg1_t *mm_map(const mm_idx_t *mi, int l_seq, const char *seq, int *n_regs, mm_tbuf_t *b, const mm_mapopt_t *opt, const char *qname)
{
mm_reg1_t *regs;
if (mm_verbose >= 10) fprintf(stderr, "===> %s <===\n", qname);
if (mm_verbose >= 11) fprintf(stderr, "===> %s <===\n", qname);
b->mini.n = 0;
mm_sketch(b->km, seq, l_seq, mi->w, mi->k, 0, mi->is_hpc, &b->mini);
if (opt->sdust_thres > 0)