From b56cd790f6e774652c9ac9b4e5310bff9441335f Mon Sep 17 00:00:00 2001 From: Heng Li Date: Mon, 26 Jun 2017 15:41:55 -0400 Subject: [PATCH] enabled kalloc (was a mistake) Not using kalloc leads to significant malloc overhead. --- Makefile | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/Makefile b/Makefile index a75bd1d..722be8f 100644 --- a/Makefile +++ b/Makefile @@ -1,6 +1,6 @@ CC= gcc CFLAGS= -g -Wall -O2 -Wc++-compat -Wno-unused-function -CPPFLAGS= +CPPFLAGS= -DHAVE_KALLOC INCLUDES= -I. OBJS= kalloc.o kthread.o misc.o bseq.o sketch.o chain.o align.o sdust.o \ index.o format.o map.o ksw2_extz2_sse.o