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update dependency; delete minimap2-lite on clean

This commit is contained in:
Heng Li 2017-07-18 14:48:46 -04:00
parent 293a7049f3
commit 947cf162be
1 changed files with 2 additions and 1 deletions
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3
Makefile
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@ -5,7 +5,7 @@ INCLUDES= -I.
OBJS= kthread.o kalloc.o ksw2_extz2_sse.o ksw2_extd2_sse.o misc.o bseq.o \ OBJS= kthread.o kalloc.o ksw2_extz2_sse.o ksw2_extd2_sse.o misc.o bseq.o \
sketch.o sdust.o index.o chain.o align.o hit.o map.o format.o sketch.o sdust.o index.o chain.o align.o hit.o map.o format.o
PROG= minimap2 PROG= minimap2
PROG_EXTRA= sdust PROG_EXTRA= sdust minimap2-lite
LIBS= -lm -lz -lpthread LIBS= -lm -lz -lpthread
ifeq ($(sse2only),) ifeq ($(sse2only),)
@ -44,6 +44,7 @@ depend:
align.o: minimap.h mmpriv.h bseq.h ksw2.h kalloc.h align.o: minimap.h mmpriv.h bseq.h ksw2.h kalloc.h
bseq.o: bseq.h kseq.h bseq.o: bseq.h kseq.h
chain.o: minimap.h mmpriv.h bseq.h kalloc.h chain.o: minimap.h mmpriv.h bseq.h kalloc.h
example.o: minimap.h kseq.h
format.o: mmpriv.h minimap.h bseq.h format.o: mmpriv.h minimap.h bseq.h
hit.o: mmpriv.h minimap.h bseq.h kalloc.h hit.o: mmpriv.h minimap.h bseq.h kalloc.h
index.o: kthread.h bseq.h minimap.h mmpriv.h kvec.h kalloc.h khash.h index.o: kthread.h bseq.h minimap.h mmpriv.h kvec.h kalloc.h khash.h