From 709b6ec1f13912860ad0d9f38806682c14d74486 Mon Sep 17 00:00:00 2001
From: Heng Li <lh3@me.com>
Date: Fri, 8 Sep 2017 22:42:39 -0400
Subject: [PATCH] increase seed occurrences

---
 main.c | 1 +
 1 file changed, 1 insertion(+)

diff --git a/main.c b/main.c
index 6db80fe..b9c59d5 100644
--- a/main.c
+++ b/main.c
@@ -166,6 +166,7 @@ int main(int argc, char *argv[])
 				opt.min_dp_max = 50;
 				opt.best_n = 10;
 				opt.bw = 100;
+				opt.mid_occ_frac = 1e-4f;
 			} else if (strcmp(optarg, "splice") == 0 || strcmp(optarg, "cdna") == 0) {
 				k = 15, w = 5;
 				opt.flag |= MM_F_SPLICE | MM_F_SPLICE_FOR | MM_F_SPLICE_REV;