diff --git a/map.c b/map.c index c6513d3..a2a8c14 100644 --- a/map.c +++ b/map.c @@ -188,7 +188,6 @@ mm_reg1_t *mm_map_frag(const mm_mapopt_t *opt, const mm_idx_t *mi, mm_tbuf_t *b, // convert to local representation m = (mm_match_t*)kmalloc(b->km, n * sizeof(mm_match_t)); - if (mm_verbose >= 5) printf("%d\t", n); for (i = 0; i < n; ++i) { int t; mm128_t *p = &b->mini.a[i + m_st]; @@ -196,12 +195,7 @@ mm_reg1_t *mm_map_frag(const mm_mapopt_t *opt, const mm_idx_t *mi, mm_tbuf_t *b, m[i].qpos = (uint32_t)p->y; m[i].x.cr = mm_idx_get(mi, p->x>>8, &t); m[i].n = t; - if (mm_verbose >= 5) { - if (i) printf("; "); - printf("%d,%d", m[i].qpos>>1, t); - } } - if (mm_verbose >= 5) printf("\n"); #if 0 int last = -1, last2 = -1; // pair k-mer thinning @@ -265,7 +259,6 @@ mm_reg1_t *mm_map_frag(const mm_mapopt_t *opt, const mm_idx_t *mi, mm_tbuf_t *b, mm_reg1_t *mm_map(const mm_idx_t *mi, int l_seq, const char *seq, int *n_regs, mm_tbuf_t *b, const mm_mapopt_t *opt, const char *qname) { - if (mm_verbose >= 5) printf("=====> %s <=====\n", qname); b->mini.n = 0; mm_sketch(b->km, seq, l_seq, mi->w, mi->k, 0, mi->is_hpc, &b->mini); if (opt->sdust_thres > 0)