From 6908dc59a5c4354a99563e6a78c7c15a69e03972 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Ma=C3=ABl=20Kerbiriou?= Date: Wed, 4 Jul 2018 15:53:27 +0200 Subject: [PATCH] --splice implied when searching for splicing sites on single strand --- options.c | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/options.c b/options.c index a35bf8d..2c816f8 100644 --- a/options.c +++ b/options.c @@ -49,7 +49,7 @@ void mm_mapopt_init(mm_mapopt_t *opt) void mm_mapopt_update(mm_mapopt_t *opt, const mm_idx_t *mi) { - if ((opt->flag & MM_F_SPLICE_FOR) && (opt->flag & MM_F_SPLICE_REV)) + if ((opt->flag & MM_F_SPLICE_FOR) || (opt->flag & MM_F_SPLICE_REV)) opt->flag |= MM_F_SPLICE; if (opt->mid_occ <= 0) opt->mid_occ = mm_idx_cal_max_occ(mi, opt->mid_occ_frac);