diff --git a/README.md b/README.md index 21f69f0..50bdc94 100644 --- a/README.md +++ b/README.md @@ -10,6 +10,8 @@ cd minimap2 && make ./minimap2 -ax map10k MT-human.mmi test/MT-orang.fa > test.sam # long-read overlap (no test data) ./minimap2 -x ava-pb your-reads.fa your-reads.fa > overlaps.paf +# spliced alignment (no test data) +./minimap2 -ax splice ref.fa rna-seq-reads.fa > spliced.sam # man page man ./minimap2.1 ```