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added two more new lines

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Heng Li 2017-07-01 11:32:49 -04:00
parent cb6c277c62
commit 5ebe868db5
1 changed files with 2 additions and 0 deletions
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minimap2.1
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@ -246,6 +246,7 @@ _
11 int Number bases, including gaps, in the mapping 11 int Number bases, including gaps, in the mapping
12 int Mapping quality (0-255 with 255 for missing) 12 int Mapping quality (0-255 with 255 for missing)
.TE .TE
.PP .PP
When alignment is available, column 11 gives the total number of sequence When alignment is available, column 11 gives the total number of sequence
matches, mismatches and gaps in the alignment; column 10 divided by column 11 matches, mismatches and gaps in the alignment; column 10 divided by column 11
@ -267,6 +268,7 @@ ms i DP score of the max scoring segment in the alignment
nn i Number of ambiguous bases in the alignment nn i Number of ambiguous bases in the alignment
cg Z CIGAR string (only in PAF) cg Z CIGAR string (only in PAF)
.TE .TE
.SH SEE ALSO .SH SEE ALSO
.PP .PP
miniasm(1), minimap(1), bwa(1). miniasm(1), minimap(1), bwa(1).