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r1059: with --rmq, use the larger bandwidth

This commit is contained in:
Heng Li 2021-05-26 23:01:49 -04:00
parent 1776c0c645
commit 4f8d1bc360
1 changed files with 3 additions and 1 deletions
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4
main.c
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@ -7,7 +7,7 @@
#include "mmpriv.h" #include "mmpriv.h"
#include "ketopt.h" #include "ketopt.h"
#define MM_VERSION "2.19-r1057" #define MM_VERSION "2.19-r1059-dirty"
#ifdef __linux__ #ifdef __linux__
#include <sys/resource.h> #include <sys/resource.h>
@ -296,6 +296,8 @@ int main(int argc, char *argv[])
} }
if (!fnw && !(opt.flag&MM_F_CIGAR)) if (!fnw && !(opt.flag&MM_F_CIGAR))
ipt.flag |= MM_I_NO_SEQ; ipt.flag |= MM_I_NO_SEQ;
if (opt.bw < opt.bw_long && (opt.flag&MM_F_RMQ))
opt.bw = opt.bw_long;
if (mm_check_opt(&ipt, &opt) < 0) if (mm_check_opt(&ipt, &opt) < 0)
return 1; return 1;
if (opt.best_n == 0) { if (opt.best_n == 0) {