From 47b646acbf0e551dd80411545b72439c9ed69f98 Mon Sep 17 00:00:00 2001 From: Heng Li Date: Mon, 6 Jan 2020 21:13:33 -0500 Subject: [PATCH] r961: print indexed length --- index.c | 4 ++-- main.c | 2 +- 2 files changed, 3 insertions(+), 3 deletions(-) diff --git a/index.c b/index.c index 164e8e5..6a49bb1 100644 --- a/index.c +++ b/index.c @@ -117,8 +117,8 @@ void mm_idx_stat(const mm_idx_t *mi) if (kh_key(h, k)&1) ++n1; } } - fprintf(stderr, "[M::%s::%.3f*%.2f] distinct minimizers: %d (%.2f%% are singletons); average occurrences: %.3lf; average spacing: %.3lf\n", - __func__, realtime() - mm_realtime0, cputime() / (realtime() - mm_realtime0), n, 100.0*n1/n, (double)sum / n, (double)len / sum); + fprintf(stderr, "[M::%s::%.3f*%.2f] distinct minimizers: %d (%.2f%% are singletons); average occurrences: %.3lf; average spacing: %.3lf; total length: %ld\n", + __func__, realtime() - mm_realtime0, cputime() / (realtime() - mm_realtime0), n, 100.0*n1/n, (double)sum / n, (double)len / sum, (long)len); } int mm_idx_index_name(mm_idx_t *mi) diff --git a/main.c b/main.c index a5633c2..1b1fa81 100644 --- a/main.c +++ b/main.c @@ -7,7 +7,7 @@ #include "mmpriv.h" #include "ketopt.h" -#define MM_VERSION "2.17-r954-dirty" +#define MM_VERSION "2.17-r961-dirty" #ifdef __linux__ #include