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Merge remote-tracking branch 'origin/master'

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Heng Li 2018-03-26 14:37:17 -04:00
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@ -229,7 +229,7 @@ sorting) still work with such BAM records; tools that read CIGAR will
effectively ignore these records. It has been decided that future tools will effectively ignore these records. It has been decided that future tools will
will seamlessly recognize long-cigar records generated by option `-L`. will seamlessly recognize long-cigar records generated by option `-L`.
**TD;DR**: if you work with ultra-long reads and use tools that only process **TL;DR**: if you work with ultra-long reads and use tools that only process
BAM files, please add option `-L`. BAM files, please add option `-L`.
#### <a name="cs"></a>The cs optional tag #### <a name="cs"></a>The cs optional tag