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r473: don't count introns into blen

This commit is contained in:
Heng Li 2017-10-05 14:37:21 -04:00
parent 1a90bc8603
commit 3ff6eda3a4
2 changed files with 2 additions and 2 deletions
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2
align.c
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@ -99,7 +99,7 @@ static void mm_update_extra(mm_extra_t *p, const uint8_t *qseq, const uint8_t *t
uint8_t b[4]; uint8_t b[4];
b[0] = tseq[toff], b[1] = tseq[toff+1]; b[0] = tseq[toff], b[1] = tseq[toff+1];
b[2] = tseq[toff+len-2], b[3] = tseq[toff+len-1]; b[2] = tseq[toff+len-2], b[3] = tseq[toff+len-1];
toff += len, p->blen += len; toff += len;
} }
} }
p->dp_max = max; p->dp_max = max;

2
main.c
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@ -6,7 +6,7 @@
#include "mmpriv.h" #include "mmpriv.h"
#include "getopt.h" #include "getopt.h"
#define MM_VERSION "2.2-r472-dirty" #define MM_VERSION "2.2-r473-dirty"
#ifdef __linux__ #ifdef __linux__
#include <sys/resource.h> #include <sys/resource.h>