r230: code formatting changes only
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@ -87,10 +87,8 @@ highlighted in bold.
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## Limitations
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## Limitations
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* Minimap2 may produce suboptimal alignments through long low-complexity
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* Minimap2 may produce suboptimal alignments through long low-complexity
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regions where seed positions may be inaccurate.
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regions where seed positions may be suboptimal. This should not be a big
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concern because even the optimal alignment may be wrong in such regions.
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* Minimap2 may produce poor alignments that may need post-filtering. We are
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still exploring a reliable and consistent way to report good alignments.
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* Minimap2 does not work well with Illumina short reads as of now.
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* Minimap2 does not work well with Illumina short reads as of now.
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2
main.c
2
main.c
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@ -8,7 +8,7 @@
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#include "minimap.h"
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#include "minimap.h"
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#include "mmpriv.h"
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#include "mmpriv.h"
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#define MM_VERSION "2.0-r229-dirty"
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#define MM_VERSION "2.0-r230-dirty"
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void liftrlimit()
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void liftrlimit()
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{
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{
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@ -1,4 +1,4 @@
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.TH minimap2 1 "29 July 2017" "minimap2-2.0-r224-dirty" "Bioinformatics tools"
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.TH minimap2 1 "30 July 2017" "minimap2-2.0-r230-dirty" "Bioinformatics tools"
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.SH NAME
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.SH NAME
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.PP
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.PP
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minimap2 - mapping and alignment between collections of DNA sequences
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minimap2 - mapping and alignment between collections of DNA sequences
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@ -348,10 +348,6 @@ where seed positions may be suboptimal. This should not be a big concern
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because even the optimal alignment may be wrong in such regions.
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because even the optimal alignment may be wrong in such regions.
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.TP
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.TP
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*
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*
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Minimap2 may produce poor alignments that may need post-filtering. We are still
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exploring a reliable and consistent way to report good alignments.
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.TP
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*
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Minimap2 does not work well with Illumina short reads as of now.
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Minimap2 does not work well with Illumina short reads as of now.
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.TP
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.TP
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*
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*
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