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r773: fixed an integer overflow

This commit is contained in:
Heng Li 2018-05-11 10:01:23 -04:00
parent 7ec6721c44
commit 10c6dd2551
2 changed files with 2 additions and 2 deletions
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2
ksw2_extd2_sse.c
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@ -111,7 +111,7 @@ void ksw_extd2_sse(void *km, int qlen, const uint8_t *query, int tlen, const uin
for (t = 0; t < tlen_ * 16; ++t) H[t] = KSW_NEG_INF; for (t = 0; t < tlen_ * 16; ++t) H[t] = KSW_NEG_INF;
} }
if (with_cigar) { if (with_cigar) {
mem2 = (uint8_t*)kmalloc(km, ((qlen + tlen - 1) * n_col_ + 1) * 16); mem2 = (uint8_t*)kmalloc(km, ((size_t)(qlen + tlen - 1) * n_col_ + 1) * 16);
p = (__m128i*)(((size_t)mem2 + 15) >> 4 << 4); p = (__m128i*)(((size_t)mem2 + 15) >> 4 << 4);
off = (int*)kmalloc(km, (qlen + tlen - 1) * sizeof(int) * 2); off = (int*)kmalloc(km, (qlen + tlen - 1) * sizeof(int) * 2);
off_end = off + qlen + tlen - 1; off_end = off + qlen + tlen - 1;

2
main.c
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@ -10,7 +10,7 @@
#include "getopt.h" #include "getopt.h"
#endif #endif
#define MM_VERSION "2.10-r772-dirty" #define MM_VERSION "2.10-r773-dirty"
#ifdef __linux__ #ifdef __linux__
#include <sys/resource.h> #include <sys/resource.h>