From 0238caa8b145fdfe0a262103eeda16836f4d4d97 Mon Sep 17 00:00:00 2001
From: Heng Li <lh3@me.com>
Date: Thu, 1 Mar 2018 18:23:40 -0500
Subject: [PATCH] clarify minimap2 not working for >2Gbp seq #129

---
 README.md | 4 ++++
 1 file changed, 4 insertions(+)

diff --git a/README.md b/README.md
index 1f8954f..b096fe1 100644
--- a/README.md
+++ b/README.md
@@ -346,6 +346,10 @@ mappy` or [from BioConda][mappyconda] via `conda install -c bioconda mappy`.
   possible to add non-SIMD support, but it would make minimap2 slower by
   several times.
 
+* Minimap2 does not work with a single query or database sequence up to ~2
+  billion bases (2,147,483,647 to be exact). The total length of all sequences
+  can well exceed this threshold.
+
 
 
 [paf]: https://github.com/lh3/miniasm/blob/master/PAF.md