ebanks ffeb3fd80d Thanks to Guillermo, I found a bug in the Unified Genotyper output: GL was posteriors instead of likelihoods. Not a huge deal because the ... priors were flat, but fixed nonetheless. Also, needed to update Tribble. Minor updates to the Beagle input maker. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3461 348d0f76-0448-11de-a6fe-93d51630548a		2010-05-28 19:28:26 +00:00
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edu.mit.broad	A cleaned up functioning early, early access version of Queue for others to play with and provide feedback about next steps.	2010-05-23 20:21:09 +00:00
gov.nist	Adding Jama for Ryan.	2010-04-27 14:30:36 +00:00
net.sf	Switched over to reviewed version of Picard patch. In process, did some optimization to the IntervalSharder	2010-05-08 14:12:22 +00:00
org.broad	Thanks to Guillermo, I found a bug in the Unified Genotyper output: GL was posteriors instead of likelihoods. Not a huge deal because the	2010-05-28 19:28:26 +00:00
org.reflections	updating the reflections library; Matt found a problem where the reflections library doesn't sort out non-java objects from the classpath (affects only OS X so far). I'll push back the changes to	2010-05-06 02:08:41 +00:00