Mark DePristo ffea6dd95f HaplotypeCaller now has the ability to only consider the best N haplotypes for genotyping ... -- Added a -dontGenotype mode for testing assembly efficiency -- However, it looks like this has a very negative impact on the quality of the results, so the code should be deleted		2013-03-20 22:54:36 -04:00
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src/org/broadinstitute/sting	HaplotypeCaller now has the ability to only consider the best N haplotypes for genotyping	2013-03-20 22:54:36 -04:00
test/org/broadinstitute/sting	Merge pull request #120 from broadinstitute/aw_reduce_reads_clear_name_cache	2013-03-20 19:47:42 -07:00