gatk-3.8/public/scala/qscript/org/broadinstitute/sting/queue/qscripts
Eric Banks 843384e435 Rename hg19 files in bundle to b37 since that's what they are 2012-11-14 11:47:09 -05:00
..
examples RetryMemoryLimit now works with Scatter/Gather. 2012-10-09 21:51:03 -04:00
lib Mostly small changes to my own scala scripts: .vcf.gz compatibility for output files, smarter beagle generation, simple script to scatter-gather combine variants. Whole genome indel calling now uses the gold standard indel set. 2012-02-22 17:20:04 -05:00
DataProcessingPipeline.scala Fixed null checkes in ArgumentTypeDescriptor due to ArgumentMatchValue updates. 2012-10-18 16:57:15 -04:00
GATKResourcesBundle.scala Rename hg19 files in bundle to b37 since that's what they are 2012-11-14 11:47:09 -05:00
MethodsDevelopmentCallingPipeline.scala Turning off PHONE HOME option in the MDCP 2012-01-27 11:13:30 -05:00
PacbioProcessingPipeline.scala Added explicit @ClassType annotations to @Argument for Option[Int] or Option[Double] since scala seems to change the reflected type to Option[Object] on some systems. 2012-10-19 13:20:29 -04:00