gatk3的最后一个经典版本3.8

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Valentin Ruano Rubio fef63ce6a8 Make sure that multi-alleleic uninformative PLs (0,0,...,0) stay uninformative after biallelization. Addresses issue #1439 (thus #1437). Fixes a bug where non informative PLs were not handled appropriatelly when calculating multi-allelic site QUAL values. This was resulting in long execution times for very large datasets (~200,000 samples in the case of ExAC2).		2016-07-25 17:19:03 -04:00
.github	Add "GATK4 Implications" section to GATK3 pull request template	2016-05-06 13:39:47 -04:00
licensing	Update licenses	2016-03-05 01:09:43 -08:00
protected	Make sure that multi-alleleic uninformative PLs (0,0,...,0) stay uninformative after biallelization.	2016-07-25 17:19:03 -04:00
public	Throw an exception for invalid Picard intervals	2016-07-15 11:20:53 -04:00
settings/helpTemplates	GATKDocs overhaul	2016-05-29 16:35:08 -04:00
.gitignore	Added issue and pull request templates	2016-04-04 13:27:45 -04:00
README.md	Update README file for the 2.6 release	2013-06-20 13:08:29 -04:00
ant-bridge.sh	Added faster built executable, non-packaged jars.	2014-11-05 00:30:46 +08:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
pom.xml	Update pom versions to mark the start of GATK 3.7 development	2016-06-01 17:21:48 -04:00

The Genome Analysis Toolkit