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gatk-3.8/playground/java/src/org/broadinstitute/sting/gatk/walkers
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hanna bb94c853f8 Added WalkerManager -- a class that dynamically loads available walkers 
from the jar file.  For now, added placeholder Walker interface so that
WalkerManager could work with classes of type Walker rather than classes 
of type Object.


git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@85 348d0f76-0448-11de-a6fe-93d51630548a
 		2009-03-17 23:22:37 +00:00
..
AlignedReadsHistoWalker.java Added WalkerManager -- a class that dynamically loads available walkers 2009-03-17 23:22:37 +00:00
AlleleFrequencyWalker.java Partial implementation of single sample allele calling 2009-03-16 19:30:42 +00:00
BaseQualityHistoWalker.java Added WalkerManager -- a class that dynamically loads available walkers 2009-03-17 23:22:37 +00:00
BasicLociWalker.java Added WalkerManager -- a class that dynamically loads available walkers 2009-03-17 23:22:37 +00:00
BasicReadWalker.java Added WalkerManager -- a class that dynamically loads available walkers 2009-03-17 23:22:37 +00:00
CountLociWalker.java git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@56 348d0f76-0448-11de-a6fe-93d51630548a 2009-03-15 22:42:24 +00:00
CountReadsWalker.java git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@56 348d0f76-0448-11de-a6fe-93d51630548a 2009-03-15 22:42:24 +00:00
DepthOfCoverageWalker.java git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@56 348d0f76-0448-11de-a6fe-93d51630548a 2009-03-15 22:42:24 +00:00
LocusWalker.java Added WalkerManager -- a class that dynamically loads available walkers 2009-03-17 23:22:37 +00:00
MismatchCounterWalker.java Added WalkerManager -- a class that dynamically loads available walkers 2009-03-17 23:22:37 +00:00
NullWalker.java Added WalkerManager -- a class that dynamically loads available walkers 2009-03-17 23:22:37 +00:00
PileupWalker.java git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@56 348d0f76-0448-11de-a6fe-93d51630548a 2009-03-15 22:42:24 +00:00
PrintReadsWalker.java git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@56 348d0f76-0448-11de-a6fe-93d51630548a 2009-03-15 22:42:24 +00:00
ReadWalker.java Added WalkerManager -- a class that dynamically loads available walkers 2009-03-17 23:22:37 +00:00
SingleSampleGenotyper.java git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@56 348d0f76-0448-11de-a6fe-93d51630548a 2009-03-15 22:42:24 +00:00
Walker.java Added WalkerManager -- a class that dynamically loads available walkers 2009-03-17 23:22:37 +00:00