A plugin enabled implementation of DiagnoseTargets Summarized Changes: ------------------- * move argument collection into Thresholder object * make thresholder object private member of all statistics classes * rework the logic of the mate pairing thresholds * update unit and integration tests to reflect the new behavior * Implements Locus Statistic plugins * Extend Locus Statistic plugins to determine sample status * Export all common plugin functionality into utility class * Update tests accordingly [fixes #48465557] |
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| org/broadinstitute/sting | ||