gatk3的最后一个经典版本3.8

Mauricio Carneiro fcc21180e8 Added hardClipLeadingInsertions UnitTest for the ReadClipper ... fixed issue where a read starting with an insertion followed by a deletion would break, clipper can now safely clip the insertion and the deletion if that's the case. note: test is turned off until contract changes to allow hanging insertions (left/right).		2011-12-16 18:02:47 -05:00
public	Added hardClipLeadingInsertions UnitTest for the ReadClipper	2011-12-16 18:02:47 -05:00
settings	Revved Picard to incorporate tfennell's AsyncSAMFileWriter.	2011-12-06 10:37:42 -05:00
.gitignore	Minor additions to the shared .gitignore file, now that Mark has checked one in.	2011-10-26 12:24:28 -04:00
LICENSE	One last test...	2011-06-28 19:18:17 -04:00
build.xml	Extensive unit test for GenotypeContextUnitTest	2011-11-20 18:28:01 -05:00
ivy.xml	Updating the HybridSelectionPipeline for SnpEff 2.0.4 RC3	2011-11-17 14:46:12 -05:00