gatk-3.8/java
rpoplin 913db5d1ab Unfortunately when annotating sites with the UG the -G None option was wiping out the single annotations added by -A options
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4625 348d0f76-0448-11de-a6fe-93d51630548a
2010-11-04 19:27:23 +00:00
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config Provide a default logger, some config settings, and some doc updates. 2009-04-29 02:06:05 +00:00
src Unfortunately when annotating sites with the UG the -G None option was wiping out the single annotations added by -A options 2010-11-04 19:27:23 +00:00
test Bug fix to GenotypeConcordance. AC metrics get instantiated based on number of eval samples; if Comp has more samples, we can see AC indeces outside the bounds of the array. 2010-11-03 19:23:03 +00:00