gatk-3.8/protected/java
Mauricio Carneiro d004bfbe6f walker to calculate per base coverage distribution
-- Base distribution optionally includes deletions
-- Implemented an optional filtered coverage distribution option
-- Integration tests added for every feature of the traversal

This walker is specially fast for the task due to the ability to calculate uncovered bases without having to visit the loci. This capability should be made generic in the future for the advantage of DiagnoseTargets and DepthOfCoverage.
GSATDG-45 #resolve
2013-02-07 16:33:05 -05:00
..
src/org/broadinstitute/sting walker to calculate per base coverage distribution 2013-02-07 16:33:05 -05:00
test/org/broadinstitute/sting walker to calculate per base coverage distribution 2013-02-07 16:33:05 -05:00