chartl 6dec042288 Re-enabling indel cleaning, explicitly calling fix mates in the case where indel cleaning is not scatter/gathered ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4324 348d0f76-0448-11de-a6fe-93d51630548a		2010-09-21 20:37:49 +00:00
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depristo	More Queue scripts for analysis	2010-09-12 14:04:10 +00:00
examples	At chartl's superb suggestion, command line files are now all Files instead of old method of sometimes "has a File". Should be easier when reassigning them.	2010-09-02 21:30:48 +00:00
kshakir	At chartl's superb suggestion, command line files are now all Files instead of old method of sometimes "has a File". Should be easier when reassigning them.	2010-09-02 21:30:48 +00:00
rpoplin	At chartl's superb suggestion, command line files are now all Files instead of old method of sometimes "has a File". Should be easier when reassigning them.	2010-09-02 21:30:48 +00:00
fullCallingPipeline.q	Re-enabling indel cleaning, explicitly calling fix mates in the case where indel cleaning is not scatter/gathered	2010-09-21 20:37:49 +00:00
recalibrate.scala	At chartl's superb suggestion, command line files are now all Files instead of old method of sometimes "has a File". Should be easier when reassigning them.	2010-09-02 21:30:48 +00:00