gatk3的最后一个经典版本3.8

Ami Levy-Moonshine fac0bce916 add RunCoveredByNSamplesSites; changes in CoveredByNSamplesSites so it can work in parallel; also, move it to diagnostics		2013-01-10 21:26:49 -05:00
licensing	Final final final version of the license.	2012-07-20 18:00:02 -04:00
protected/java	Resolve protected->public dependencies for BQSR by wrapping the BQSR-specific arguments in a new class.	2013-01-08 16:23:29 -05:00
public	add RunCoveredByNSamplesSites; changes in CoveredByNSamplesSites so it can work in parallel; also, move it to diagnostics	2013-01-10 21:26:49 -05:00
settings	Final r119 tribble jar	2012-11-02 14:30:33 -04:00
.gitignore	adding some directories to gitignore	2012-09-27 11:09:41 -04:00
build.xml	Re-enabling contracts in tests in build.xml	2013-01-02 11:29:25 -05:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Use build jars in test classpaths by default	2012-11-28 22:57:04 -05:00