gatk-3.8/protected/gatk-tools-protected
vruano e3d5d96076 Added the AF indepdent calculator for any ploidy but seems that is not doing a good job for haploid
Addresses issue #1078 by implementing a any-ploidy version of the independent-allele-exact-ac-calculator already available for diploids.

Notice that this will change result somewhat when dealing with noisy data (low GQs).
2015-11-07 16:17:30 -05:00
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src Added the AF indepdent calculator for any ploidy but seems that is not doing a good job for haploid 2015-11-07 16:17:30 -05:00
pom.xml Update pom versions to mark the start of GATK 3.5 development 2015-05-15 00:44:54 -04:00