gatk-3.8/public/scala/test/org/broadinstitute/sting/queue/pipeline
Roger Zurawicki 63cf7ec7ec Added more primitives to GATK Report Column Type
- The Integer column type now accepts byte and shorts
 - Updated Unit Tests and added a new testParse() test

Signed-off-by: Mauricio Carneiro <carneiro@broadinstitute.org>
2012-03-28 09:07:54 -04:00
..
examples Device files like /dev/null are now tracked as special by Queue and are not used to generate .out file paths, scattered into a temporary directory, gathered, deleted, etc. 2012-01-23 16:17:04 -05:00
DataProcessingPipelineTest.scala Added test mode to DPP 2011-12-12 18:29:06 -05:00
PacbioProcessingPipelineTest.scala Updating the MD5s 2011-12-21 15:14:05 -05:00
PipelineTest.scala Added more primitives to GATK Report Column Type 2012-03-28 09:07:54 -04:00
PipelineTestEvalSpec.scala No more "Q-<pid>@<host>". Generated log file names now use the first output + ".out" (ex. my.vcf.out) or the name of the first QScript plus the order the function was added (ex. MyScript-1.out). The same function added twice with the same outputs will now have the same default logs, meaning the 2nd instance of the function won't be added to the graph twice. 2012-01-08 12:11:55 -05:00
PipelineTestSpec.scala No more "Q-<pid>@<host>". Generated log file names now use the first output + ".out" (ex. my.vcf.out) or the name of the first QScript plus the order the function was added (ex. MyScript-1.out). The same function added twice with the same outputs will now have the same default logs, meaning the 2nd instance of the function won't be added to the graph twice. 2012-01-08 12:11:55 -05:00