gatk3的最后一个经典版本3.8

delangel f8e2153c71 Merge pull request #25 from broadinstitute/md_hmm_fail_GSA-751 ... Md hmm fail gsa 751		2013-02-09 16:43:50 -08:00
licensing	Removing the symlink from the private license file	2013-02-09 12:57:44 -05:00
protected/java	Updating MD5s due to changes in HMM	2013-02-09 19:19:28 -05:00
public	Final version of PairHMMs with correct edge conditions	2013-02-09 19:19:22 -05:00
settings	Replace org.broadinstitute.variant with jar built from the Picard repo	2013-02-05 17:24:25 -05:00
.gitignore	Fixing the licensing scripts	2013-01-26 13:42:49 -05:00
build.xml	Minor build.xml cleanup post-variant-migration	2013-02-06 11:16:52 -05:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Replace org.broadinstitute.variant with jar built from the Picard repo	2013-02-05 17:24:25 -05:00