gatk-3.8/scala/qscript/chartl
chartl f8dd59c1d1 Tightening of the batch merging pipeline. Optimized to run on hour queue, so please: if you run this, crush 'hour' with it. Testing is forthcoming, but it merged 700 samples overnight.
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4805 348d0f76-0448-11de-a6fe-93d51630548a
2010-12-08 14:36:23 +00:00
..
RefineGenotypesAndMerge.q Commit for Ryan 2010-10-05 19:04:10 +00:00
batchMergePipeline.q Tightening of the batch merging pipeline. Optimized to run on hour queue, so please: if you run this, crush 'hour' with it. Testing is forthcoming, but it merged 700 samples overnight. 2010-12-08 14:36:23 +00:00
fullCallingPipelineV2.q Major refactoring of library and full calling pipeline (v2) structure. 2010-12-05 02:33:54 +00:00
omni_qc.q Bug fix to GenotypeConcordance. AC metrics get instantiated based on number of eval samples; if Comp has more samples, we can see AC indeces outside the bounds of the array. 2010-11-03 19:23:03 +00:00
private_mutations.q Sometimes, inputs are really outputs in disguise. 2010-11-05 19:51:16 +00:00