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VectorPairHMM
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Updated licenses for 2015
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2015-08-06 15:23:11 -04:00 |
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c
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After renaming the packages, instead of updating the JNI library used for testing bwa, moving the classes to the archive.
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2014-05-19 17:36:41 -04:00 |
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chainFiles
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The contig is named MT not M in b36. Delivers PT68890442.
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2014-04-08 10:03:47 -04:00 |
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doc
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Updated readme in public/doc to just point to the website
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2015-03-12 11:52:48 -04:00 |
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external-example
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Updated licenses for 2015
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2015-08-06 15:23:11 -04:00 |
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gatk-engine
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Fixed an NA12878 Knowledgebase test, and made the RDQ option for BQSR binning hidden
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2015-10-27 09:44:26 -04:00 |
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gatk-queue
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Minor updates to previous ParallelShell commit.
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2015-09-29 09:36:37 -03:00 |
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gatk-queue-extensions-generator
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Updated licenses for 2015
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2015-08-06 15:23:11 -04:00 |
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gatk-queue-extensions-public
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Minor updates to previous ParallelShell commit.
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2015-09-29 09:36:37 -03:00 |
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gatk-root
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Move htsjdk & picard to version 1.140
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2015-10-08 10:42:05 -04:00 |
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gatk-tools-public
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Enable family-level stratification (if a ped file is provided)
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2015-10-28 09:55:04 -04:00 |
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gatk-utils
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Finished draft of code for new map-combine-reduce annotation framework
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2015-10-27 09:23:29 -04:00 |
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gsalib
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Update pom versions to mark the start of GATK 3.5 development
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2015-05-15 00:44:54 -04:00 |
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java/config
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Refactored maven directories and java packages replacing "sting" with "gatk".
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2014-05-19 17:36:39 -04:00 |
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package-tests
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Update pom versions to mark the start of GATK 3.5 development
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2015-05-15 00:44:54 -04:00 |
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perl
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Fixing the liftover script to not require strict VCF header validation.
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2013-11-07 09:02:17 -05:00 |
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repo
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Updated gatk so it compiles on java 8
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2015-06-26 15:59:46 -04:00 |
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src/main
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Added faster built executable, non-packaged jars.
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2014-11-05 00:30:46 +08:00 |
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pom.xml
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Update pom versions to mark the start of GATK 3.5 development
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2015-05-15 00:44:54 -04:00 |
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