zzh
/
gatk-3.8
1
0
Fork 0
Code Issues Pull Requests Packages Projects Releases Wiki Activity
gatk-3.8/java/src/org/broadinstitute/sting/gatk/walkers
History
hanna 53fe9acf65 Make command-line arguments available in walker constructor, provide back door from 
walker into GATK itself, do some cleanup of output messages, and add some bug fixes.
Command-line arguments in walkers are now feature-complete, but still a bit messy.


git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@203 348d0f76-0448-11de-a6fe-93d51630548a
 		2009-03-26 20:45:27 +00:00
..
CountLociWalker.java Collapse the walker hierarchy, in preparation for in-walker output streams less hokey walker args. 2009-03-26 16:22:35 +00:00
CountReadsWalker.java Collapse the walker hierarchy, in preparation for in-walker output streams less hokey walker args. 2009-03-26 16:22:35 +00:00
DepthOfCoverageWalker.java Collapse the walker hierarchy, in preparation for in-walker output streams less hokey walker args. 2009-03-26 16:22:35 +00:00
LocusWalker.java Collapse the walker hierarchy, in preparation for in-walker output streams less hokey walker args. 2009-03-26 16:22:35 +00:00
NullWalker.java Collapse the walker hierarchy, in preparation for in-walker output streams less hokey walker args. 2009-03-26 16:22:35 +00:00
PileupWalker.java Collapse the walker hierarchy, in preparation for in-walker output streams less hokey walker args. 2009-03-26 16:22:35 +00:00
PrintReadsWalker.java Collapse the walker hierarchy, in preparation for in-walker output streams less hokey walker args. 2009-03-26 16:22:35 +00:00
ReadWalker.java Collapse the walker hierarchy, in preparation for in-walker output streams less hokey walker args. 2009-03-26 16:22:35 +00:00
Walker.java Make command-line arguments available in walker constructor, provide back door from 2009-03-26 20:45:27 +00:00
WalkerName.java Make command-line arguments available in walker constructor, provide back door from 2009-03-26 20:45:27 +00:00