gatk-3.8/protected/java/src/org/broadinstitute/sting
Ryan Poplin 856c1f87c1 Allow for additional input data to be used in the VQSR for clustering but don't carry it forward into the output VCF file.
-- New -a argument in the VQSR for specifying additional data to be used in the clustering
-- New NA12878KB walker which creates ROC curves by partitioning the data along VQSLOD and calculating how many KB TP/FP's are called.
2014-01-02 14:46:04 -05:00
..
gatk Allow for additional input data to be used in the VQSR for clustering but don't carry it forward into the output VCF file. 2014-01-02 14:46:04 -05:00
utils Fixed issue > 0 log likelihoods using GraphBased likelihood engine reported by Mauricio 2013-12-13 11:19:57 -05:00
package-info.java Updated all JAVA file licenses accordingly 2013-01-10 17:06:41 -05:00